CVE-2026-31970

March 19, 2026, 1:59 p.m.

7.1
High

Description

HTSlib is a library for reading and writing bioinformatics file formats. GZI files are used to index block-compressed GZIP [BGZF] files. In the GZI loading function, `bgzf_index_load_hfile()`, it was possible to trigger an integer overflow, leading to an under- or zero-sized buffer being allocated to store the index. Sixteen zero bytes would then be written to this buffer, and, depending on the result of the overflow the rest of the file may also be loaded into the buffer as well. If the function did attempt to load the data, it would eventually fail due to not reading the expected number of records, and then try to free the overflowed heap buffer. Exploiting this bug causes a heap buffer overflow. If a user opens a file crafted to exploit this issue, it could lead to the program crashing, or overwriting of data and heap structures in ways not expected by the program. It may be possible to use this to obtain arbitrary code execution. Versions 1.23.1, 1.22.2 and 1.21.1 include fixes for this issue. The easiest work-around is to discard any `.gzi` index files from untrusted sources, and use the `bgzip -r` option to recreate them.

Product(s) Impacted

Vendor Product Versions
Htslib
  • Htslib
  • *, 1.23

Weaknesses

Common security weaknesses mapped to this vulnerability.

CWE-122
Heap-based Buffer Overflow
A heap overflow condition is a buffer overflow, where the buffer that can be overwritten is allocated in the heap portion of memory, generally meaning that the buffer was allocated using a routine such as malloc().

*CPE(s)

Affected systems and software identified for this CVE.

Type Vendor Product Version Update Edition Language Software Edition Target Software Target Hardware Other Information
a htslib htslib / / / / / / / /
a htslib htslib / / / / / / / /
a htslib htslib 1.23 / / / / / / /

CVSS Score

7.1 / 10

CVSS Data - 4.0

  • Attack Vector: NETWORK
  • Attack Complexity: LOW
  • Attack Requirements: NONE
  • Privileges Required: NONE
  • User Interaction: PASSIVE
  • Scope:
  • Confidentiality Impact: NONE
  • Integrity Impact: HIGH
  • Availability Impact: LOW
  • Exploit Maturity: NOT_DEFINED
  • CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:P/VC:N/VI:H/VA:L/SC:N/SI:N/SA:N/E:X/CR:X/IR:X/AR:X/MAV:X/MAC:X/MAT:X/MPR:X/MUI:X/MVC:X/MVI:X/MVA:X/MSC:X/MSI:X/MSA:X/S:X/AU:X/R:X/V:X/RE:X/U:X

    View Vector String

Timeline

Published: March 18, 2026, 8:16 p.m.
Last Modified: March 19, 2026, 1:59 p.m.

Status : Analyzed

CVE has been recently published to the CVE List and has been received by the NVD.

More info

*Disclaimer: Some vulnerabilities do not have an associated CPE. To enhance the data, we use AI to infer CPEs based on CVE details. This is an automated process and might not always be accurate.